Replacing sickle, which we are not sure what it does
Added moritz gene clustering code in a seperate script
Added some binaries to the bin directory
Reworked the gene clustering script
Just missing coverage extraction in the gene clustering script
Made external libraries with fasta functions and other common tools
Added some binaries to ease installation
Fixed lots of stuff with the new seperate toolbox system
Update the setup.py
Moving binaries
Moving binaries (bis)
Testing phase for gene clustering
Added linux binaries
Updated the Readme
Added JSON files from moritz's branch run003
Updated the gene clustering
Updating gene clustering
edited json files for Alinen depth profile
Creating submodule 'preprocessing'
Merge branch 'cleaning' of https://github.com/limno/gefes into cleaning