commented out the conserved moiety flag, no in conf
added unzip an zip - used for installers
moved spyder src repo inside dir structure, this way the process is more portable
already in cwd path corected
Updated to roadrunner-1.1.0-beta1; Added roadrunner.conf; pip packages use local installer

Also added comments about attempt to move spyder to setup.py install, this is a heavier process than desired