New schema base causing errors

This change introduces a number of failures in ant … test-automated 

As far as I can tell I am just 
• making the new schema
• restructuring the samples folder
• removing duplicate transforms: components/formats-api/src/loci/formats/meta/*.xsl (these should be loaded now from the specification jar)
• making the current schema "2013-10-dev-1"
• updating the unit tests for the new schema

There should be no changes to the schema itself so the generated code should be the same.

@melissalinkert have you any thoughts on what is going wrong?