JBIDE-16505 - did not remove deployment marker when module removed

JBIDE-16505 test case

Changes as requested from PR comments

Changes as requested from PR comments

Changes as requested from PR comments
JBIDE-16504 rse profile must make explicit which publish subsystem
should be used

JBIDE-16504 - test case
JBIDE-16507 - LocalFilesystemController uses incorrect temporary
deploy folder

JBIDE-16507 - not using agreed upon temp file

JBIDE-16507 - add test case
JBIDE-16532 - launch config should not keep state, causes incorrect launching
JBIDE-16533 - rse shutdown for as6 and lower does not initiate shutdown polling
JBIDE-16534 JBIDE-16535 - subsystem resolution for various servers and profiles failing
JBIDE-16534 JBIDE-16535 - test case
JBIDE-16536 - Convert OSGi Publisher to new API and to ensure it works for local and remote
JBIDE-16521 - zipped publish checkbox in server editor was broken

JBIDE-16521 - zipped publish checkbox in server editor was broken
Remove API that has been replaced by subsystems

Remove API that has been replaced by subsystems - revert some classes for now