[FIX] Gustaf: bug fix of wrongly classified del/dup
Merge pull request #427 from skrakau/develop

Bisar: converted alignment scores to integers
Merge pull request #428 from skrakau/master

Bisar: converted alignment scores to integers
[FIX] Fixing default parameters for quality values in Mason 2.
Merge pull request #431 from holtgrewe/master

[FIX] Fixing default parameters for quality values in Mason 2.
Merge pull request #430 from holtgrewe/master

[FIX] Fixing default parameters for quality values in Mason 2.
[FIX] Adjusting tests to updated quality parameters.
Merge pull request #432 from holtgrewe/fix/mason2_tests

[FIX] Adjusting tests to updated quality parameters.
[Comment] Gustaf bug fix: rm comments and improve variable init.
Merge pull request #429 from ktrappe/feature/gustaf_sv_classification

[FIX] Gustaf: bug fix of wrongly classified del/dup
[TEST] Update to test data for mason2.
Merge pull request #436 from holtgrewe/fix/mason2_test_update

[TEST] Update to test data for mason2.
[DOC] Masai: Updated README
[DOC] Masai: Updated INFO
[NOP] Masai: added deprecation warning
Merge branch 'master' into develop
Merge pull request #438 from esiragusa/develop

Merge master into develop
Merge branch 'hotfix/masai-0.7.2' into develop
Merge branch 'hotfix/masai-0.7.2'
[CLI] Yara: imported app from https://github.com/esiragusa/yara