Bump Sholl Analysis to version 3.4.2

Requested by Tiago Ferreira in

	https://github.com/fiji/fiji/issues/96

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Bump to newest parent version

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Mention the current project structure

... with external plugins and all...

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
upload-update-site: no need to special-case initial upload

The updater learnt to be lenient when 'editing' not-yet-added update
sites.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Add the Time Lapse plugins into the core Fiji plugins

It is with great pride that this developer releases the code used to
perform the analyses of the paper

	"A Doppler effect in embryonic pattern formation", Soroldoni et al
	Science 11 July 2014: Vol. 345 no. 6193 pp. 222-225
	DOI: 10.1126/science.1253089
	http://www.sciencemag.org/content/345/6193/222.abstract

to the public.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
No longer define RSyntaxTextArea's version

The Script Editor moved into imagej-ui-swing a long time ago now.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Remove erroneous property from the pom.xml file

The artifact is called bUnwarpJ, but bunwarpj.

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Stop overriding pom-scijava's minimaven.version definition

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Introduce a <dependencyManagement> section

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Add non-Fiji projects to the <dependencyManagement> section

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Bump jdom2 to 2.0.5

Version 2.0.2 is no longer available via Maven Central :-(

Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Remove duplicate artifact declarations
Fix broken GAVs
Do not use trailing _ with version properties
Remove versions from external plugins POM

We do not need to declare them anymore, since they are all managed by
the parent.
Add Image_5D
Manage the version of mpicbg:mpicbg_
Add TrakEM2_
Manage the version of org.beanshell:bsh
Manage the version of org.jpedal:jpedalSTD