modified:   NAMESPACE
	modified:   R/AllGenerics.R
	modified:   R/io.R
	modified:   R/methods-mzRpwiz.R
	modified:   src/RcppPwiz.cpp
	modified:   src/RcppPwiz.h
	modified:   src/RcppPwizModule.cpp
	new file:   src/boost/filesystem/src/operations
	new file:   src/hdf5/c++/src/H5
	new file:   src/hdf5/c++/src/H5DataTy
	new file:   src/pwiz/data/common/BinaryIndexSt
	new file:   src/pwiz/data/common/ParamT
	new file:   src/pwiz/data/m
	new file:   src/pwiz/data/msdata/BinaryDataEnc
	new file:   src/pwiz/data/msdata/Chroma
	new file:   src/pwiz/data/msdata/MSNu
	new file:   src/pwiz/data/msdata/Seri
	new file:   src/pwiz/data/msdata/Serializer
	new file:   src/pwiz/data/msdata/Serializer_mz
	new file:   src/pwiz/data/msdata/Sp
	new file:   src/pwiz/data/msdata/Spec
	new file:   src/pwiz/data/msdata/mz5/Refer
	new file:   src/pwiz/utility/mis
	new file:   src/pwiz/utility/misc/IntegerS