Rename geometry pieces to make em easier to see
Add msc project documentation
Clean out the old names for those files
Clear out garbage files
Pointless indentation changes
Remove cruft files
Remove cruft files
Meanignless whitespace change
Move non-CES essential code into a scratch file
Remove untracked scratch file
Add a separate file for the systems representation
Legal cleanup
Merge branch 'master' of arrdem.com:cortex

Conflicts:
	src/cortex/ces.clj
	src/cortex/scratch.clj