FIX: disable ASSERT statements with BOOST_DISABLE_ASSERTS
added option to check graph at every step
set contig ids from bptr values
updated integrity checks
allow size() for Read_Entry_Cont and Contig_Entry_Cont, use nonconst_size() for rest
updated graph checks; added check_leaks()
constant time Factory::unused()
more debug logs
FIX: bug where Contig_Entry objects are not deallocated
FIX: 2 different bugs with Mutation objects leaks
FIX: incomplete previous commit
access to used count directly
initialize all members
more logger messages
leak checks for MCA-s
FIX: leak MCA-s
update Cigar::check signature
flags for various build types
silence warning in Release build
FIX: unmap_trigger_len ignored; removed extra global variables