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 Committer: miguel.correa

 On branch master
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 Changes to be committed:
	new file:   Protein-degradation
	renamed:    preliminarylook.R -> R code/preliminarylook.R
	renamed:    aa_clustering.py -> assorted/aa_clustering.py
	renamed:    aa_vectors.csv -> assorted/aa_vectors.csv
	renamed:    clusters.txt -> assorted/clusters.txt
	renamed:    instabindex.csv -> assorted/instability_index.csv
	renamed:    instability_index.py -> assorted/instability_index.py
	renamed:    svr_test.py -> assorted/svr_test.py
	new file:   assorted/test.py
	deleted:    clusters.txt~
	new file:   data/.~lock.Andreas data new.xls#
	new file:   data/Andreas data new.xls
	new file:   data/Helbig et al Supplementary Table 2.xlsx
	new file:   data/aa_vectors.csv
	new file:   data/aa_vectors_1.csv
	new file:   data/aa_vectors_1.txt
	new file:   data/aa_vectors_1.txt~
	new file:   data/aa_vectors_2.csv
	new file:   data/aa_vectors_2.txt
	new file:   data/preliminary_proteins.csv
	new file:   data/proteins.txt
	new file:   data/proteinsequences.csv
	renamed:    exampleSVR.py -> examples/exampleSVR.py
	new file:   examples/example_rfecv.py
	renamed:    intermine_test.py -> examples/intermine_test.py
	deleted:    fastafile
	deleted:    lachesis_training.py
	renamed:    lachesis_extraction.py -> main/lachesis_extraction.py
	renamed:    lachesis_filtering.py -> main/lachesis_filtering.py
	renamed:    lachesis_main.py -> main/lachesis_main.py
	renamed:    lachesis_retrieval.py -> main/lachesis_retrieval.py
	new file:   main/lachesis_train.py
	new file:   main/lachesis_training.py