fix typo in Cufflinks easyconfigs
add Cufflinks 2.1.1 ictce/5.5.0 easyconfig + required patch (curtosy @JensTimmerman)
add ictce/5.5.0 easyconfigs for Bowtie2, TopHat, GMap, HTSeq + dependencies
SOAPdenovo2
removed superfluous lines in patch.
fixed white space issues.
minor style fixes in SOAPdenovo2 easyconfigs
add Cufflinks-2.0.2-ictce-5.3.0.eb

Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
add HTSeq builds

Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
add GMAP variants

Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
uncomment Cufflinks in HPCBIOS_Bioinfo

Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
added 4 bowtie2 ebconfigs using MakeCp generic block
copy full "scripts" folder and add it to PATH
removed "scripts" folder from $PATH
upgraded to vcftools-0.1.12. Added new man pages released in 0.1.12 to MANPATH
ebconfig for precompiled APBS-1.4-linux-static-x86_64
add sourceme & README.TXT for Lmod

Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
add hint on Lmod & buildsets relation

Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
prereqs pedantic comment

Signed-off-by: Fotis Georgatos <fotis.georgatos@uni.lu>
BayesTraits-1.0-linux32.eb
BayesTraits-2.0-beta-linux64.eb