Merge pull request #1 from LearningToTalk/master

This is Mary sending a pull request to herself to try to recover from a bad merge in the wrong direction.
Catching up with the massive changes Tristan made to modularize, etc.
change to height feature for /oI/, closing Issue #22
Changed vowel transcription to parallel 2 stages of consonant transcription; separated transcription and scoring of sound patterns not within the sets of 14 vowels and 24 consonants of the target dialects.
Changed vowel transcription to parallel 2 stages of consonant transcription; separated transcription and scoring of sound patterns not within the sets of 14 vowels and 24 consonants of the target dialects.
Merge pull request #23 from marybeckman/master

Made vowel parallel to consonant and separated scoring from transcription for "other" sounds