edits to ipython notebook to see if we can embed code into markdown: no
Added extensions to .gitignore for R
Transfered ipynb information to Rmd
Altered YAML header
Rough draft of Introduction section
Added mothur*logfile to the .gitignore file
Rough draft of Data Curation section
Roughed in text for Results section
added species/sample counts to first paragraph of results section
Completed Field capture of Peromyscus spp section
Add output of grid.dist file
Add mothur commands for alpha and beta diversity analysis; begin stats