replace 'foreach' and 'doParalle' with BiocParallel

- Update DESCRIPTION and NAMESPACE
- remove inst/doc directory
- rename vignette
- bump version


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/geeni@89038 bc3139a8-67e5-0310-9ffc-ced21a209358
Merge branch 'local-hedgehog'