shuffling of hypergraphs
changes to protecting specified patterns (with example patterns)
Merge branch 'master' of https://github.com/moses-smt/mosesdecoder
move methods for PDAimp into .cpp file
clean up TargetPhrase
initialise m_container
initialise m_container
initialise m_container
TargetPhrase to have pointer to the phrase table that creates it
Implement shuffling correctly
TargetPhrase to have pointer to the phrase table that creates it
TargetPhrase to have pointer to the phrase table that creates it
Merge branch 'master' of github.com:moses-smt/mosesdecoder
Merge branch 'master' of github.com:moses-smt/mosesdecoder
Incremental scoring of hypotheses.

Don't score full score vectors in hypotheses, just
the increments. The full score breakdowns (required for
nbest lists) are calculated lazily.
Simulated post-editing merge: XML update, parallel SPE script, MERT
Add alias PhraseDictionaryBitextSampling
Header and some instructions
Lower verbosity, sync with current version
Fixed (?) problem with multiple identical extractable target phrases per source phrase occurrence.