I have removed map.pores and map.throats from almost everywhere, including the documentation.  BUT I have not removed them from Tom Voronoi code. I don't want to create a bunch of conflicts so I'll let him do that.
Merge pull request #261 from PMEAL/feature/remove_pore.map

I have removed map.pores and map.throats from almost everywhere, including the documentation. BUT I have not removed them from Tom Voronoi code. I don't want to create a bunch of conflicts so I'll let him do that.