removed nucleotide diversity wrappers.
completely removed nuc div functions.
Removed seqinr and plyr from dependencies.
Begun process of reference table of functions.
Completed first draft of function table.
depreciated => deprecated.
added library call so testthat would work.
Made tests work.
genclone tests now pass.
popsub tests pass.
removed library call.
Updated date.
Merged devel branch to sequence branch

Merge branch 'devel' into sequence

Conflicts:
	DESCRIPTION
	R/sandbox.r
	man/multi.dnds.Rd
	man/multi.nd.Rd
	man/multi.td.Rd
Re-created the R manuals for the sequence data files