Remove reference to keywords. (not used)
Remove keywords
Remove limitation so 3rd party ROIs are visible.
Fix parsing of polygon and polyline.
Merge pull request #3184 from jburel/roi-lsm

Roi lsm
OMERO5.1DEV__14: add "ldap" to experimentergroup.
Update tests to set correct model object fields.

After a general review of usages of Experimenter and
ExperimenterGroup instances, all of them have been updated
to set the "ldap" field to false to avoid Hibernate exceptions.
Set "ldap" field on group creation.

This guarantees that the only way to add/remove the LDAP flag
for groups is the "omero ldap" CLI plugin. The Webclient will
automatically set "ldap" to false for newly created groups.
Updated ones will keep their previous "ldap" value.
{user,group}.py: Display "ldap" in "list".
Add findGroupDN() API method.

This allows for looking up DNs for groups. OmeroModelContextMapper
has been created as an abstract class encapsulating the common
state used by both the user and group context mappers. This logic
lacks integration tests.
Deprecate setDN().

This change is dictated by the fact, that Experimenter can
now control the "ldap" flag by setLdap(). The only place where
setDN() is still used is the Java LDAP integration test, but
that can be easily updated.
ldap.py: setdn, getdn, discover work for groups.

This commit adds two new API methods required for the
mentioned CLI commands to work. Some of the code could be
optimised further as it is similar to the user-handling
API logic.
Fix OmeroJava tests.

This also normalises the way static methods from
omero.rtypes are used in the files changed in this commit.
Fix misnamed sql file.
Fix group ldap omitted from integration test.
Fix createGroup helper in gateway to take ldap.
Fix use of helper, explicitly use keyword argument.
merge develop -Dnone -Ibreaking -Eexclude -Ssuccess-only: PR 3141 (jstree upgrade (Functionality Review Only))
merge develop -Dnone -Ibreaking -Eexclude -Ssuccess-only: PR 3193 (Add DN for groups (fix #6719).)
merge develop -Dnone -Ibreaking -Eexclude -Ssuccess-only

Repository: openmicroscopy/openmicroscopy
Excluded PRs:
  # PR 3069 aleksandra-tarkowska 'Scalebar' (user: aleksandra-tarkowska)
  # PR 3037 joshmoore 'Group sudo' (user: joshmoore)
  # PR 3187 will-moore '5 0 6 rebase' (user: will-moore)
  # PR 3156 aleksandra-tarkowska 'Templates cleanup' (user: aleksandra-tarkowska)
  # PR 3189 joshmoore 'Various minor fixes for units' (user: joshmoore)
  # PR 3086 will-moore 'Create image by tiling 12459' (user: will-moore)
  # PR 3000 jballanc 'Update artifacts for Lucene, Hibernate, and Spring' (user: jballanc)
  # PR 2585 aleksandra-tarkowska 'making time_zone and first_day_of_week configurable' (exclude comment)
  # PR 3148 jburel 'Rnd rgb' (user: jburel)
  # PR 3160 ximenesuk 'Try search repeatedly until success' (user: ximenesuk)
  # PR 3181 joshmoore 'Update to Hibernate 3.6 (See trac2570)' (label: exclude)
  # PR 3155 jburel 'Re changes' (user: jburel)
  # PR 3157 jburel 'Reset password' (user: jburel)
  # PR 3175 will-moore 'General pane web' (user: will-moore)
  # PR 3133 dominikl 'General Pane alignment' (user: dominikl)
  # PR 3188 will-moore 'Webtest removal' (user: will-moore)
  # PR 3109 dpwrussell 'Disable keyboard navigation (up, down, left, right) for jquery tabs' (user: dpwrussell)
  # PR 2182 joshmoore 'Read only flag' (user: joshmoore)
  # PR 3142 jburel 'Deprecate  methods/services' (user: jburel)
  # PR 2363 dominikl 'Java Gateway API' (label: exclude)
  # PR 3190 dominikl 'Insight units' (user: dominikl)
  # PR 3042 will-moore 'Download dataset project' (user: will-moore)
  # PR 3098 aleksandra-tarkowska 'Metadata reimport' (user: aleksandra-tarkowska)
Already up-to-date.

Merged PRs:
  # PR 3141 dpwrussell 'jstree upgrade (Functionality Review Only)'
  # PR 3193 ximenesuk 'Add DN for groups (fix #6719).'

Repository: openmicroscopy/bioformats
Excluded PRs:
  # PR 1177 rleigh-dundee 'specification: Add metadata for HDF5 embedding' (exclude comment)
  # PR 1420 qidane 'Updating samples and adding units samples' (user: qidane)
  # PR 1383 LeeKamentsky 'Fix im3 metadata' (user: LeeKamentsky)
  # PR 1161 sommerc 'Initial CellH5 Reader class' (user: sommerc)
  # PR 1366 ctrueden 'Miscellaneous cleanup' (user: ctrueden)
  # PR 1421 jburel 'Units mock' (user: jburel)
  # PR 1365 ctrueden 'PrairieView 5.2 fixes and improvements' (user: ctrueden)
  # PR 1309 melissalinkert 'Allow tile-based access of large JPEG-2000 images' (exclude comment)
  # PR 1015 qidane 'Messy binary' (exclude comment)
  # PR 1385 rleigh-dundee 'C++: Add TIFF reader' (user: rleigh-dundee)
  # PR 1419 sbesson 'Flake8 Bio-Formats Python files' (user: sbesson)
  # PR 1381 melissalinkert 'Parse physical pixel sizes from CellSens .vsi datasets' (user: melissalinkert)
  # PR 1407 melissalinkert 'TIFF: fix plane count calculation for pyramids with multiple planes' (user: melissalinkert)
  # PR 857 melissalinkert 'Initial support for Zeiss .lms files' (user: melissalinkert)
  # PR 858 melissalinkert 'Initial support for Veeco AFM data' (user: melissalinkert)
Already up-to-date.

Merged PRs:
  # PR 1362 melissalinkert 'Make FormatReader's RandomAccessInputStream transient'
Conflicting PRs (not included):
  # PR 1418 rleigh-dundee 'IFormatReader: Remove deprecated methods'

Repository: ome/scripts
Already up-to-date.

Repository: openmicroscopy/ome-documentation
Excluded PRs:
  # PR 990 kennethgillen 'for users who have compiled isapi_wsgi on x64' (user: kennethgillen)
Already up-to-date.

Generated by OME-5.1-breaking-push#190 (http://ci.openmicroscopy.org/job/OME-5.1-breaking-push/190/)