import Biostrings and cleaver
replace readFasta by Biostrings::readFasta and digest by cleaver::cleave
replace the logical determination of the rt window by an approach based on findInterval
replace for loop by vectorized matrix creation
add NEWS entry
remove unneeded line
Merge pull request #49 from sgibb/findMSeEMRTs

Modification of findMSeEMRTs to speed up searchGrid
add contrinutor
mering pull request #47
mention usage of Biostrings::readFasta and cleaver::cleave in manual page and remove ::: to fix notes
add test report generation script
new dev version