remove trailing spaces

Link: https://github.com/GeneAssembly/biosal/issues/448
Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
throw error is no memory fence is available

Link: https://github.com/GeneAssembly/biosal/issues/449
Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
add a timer for the whole running time in argonnite

Link: https://github.com/GeneAssembly/biosal/issues/436
Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
add document about stateless actors vs stateful actors

Link: https://github.com/GeneAssembly/biosal/issues/439
Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
enable 2-bit encoding for all codecs

Link: https://github.com/GeneAssembly/biosal/issues/437
Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
adjust the message size for sequence store production

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
don't use 2 bit on 1 node

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
predict bucket count if on one node

time ./scripts/development/run-argonnite-1-28.sh |tee log
15m18.219s
71deaa88265222cd8c27c88980eb5c4f29c966af  coverage_distribution.txt-canonical

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
enable work stealing

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
write coverage distribution to a directory with -o option

Link: https://github.com/GeneAssembly/biosal/issues/430
Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
put an upper bound on the sequence store production size

Link: https://github.com/GeneAssembly/biosal/issues/438
Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
disable the work-stealing code

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
verify against the maximum allowed number for active messages

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
don't use timer unless it's the main actor

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
remove some trailing spaces

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
add a timer for input streaming to kmer stores

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
isolate the transport layer

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
add an interface for active messages

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
reorganize thorium source files

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>
isolate MPI in the transport layer

Signed-off-by: Sébastien Boisvert <boisvert@anl.gov>