Initialize variables, fix empty string to be array rather than char
Remove semicolons creating empty body if statements
Remove Cross Stream Shear from post processing
Ugly #if CONSTANT unset variable cleanup
Update Makefiles to use trilinos as system headers and disable
-Wall for the fortran compiler
add MAX_CONC requirement checking
Change setup_Elem_BC to use the given num_nodes_on_side rather than using maximum, for local array
Merge pull request #24 from wortiz/cleanup-pull

Cleanup of warnings for more specific issues