Merge branch 'release-1.0.1' into develop

* release-1.0.1:
  Updated the README.
Initial pass at a few docs.
More RTD tweaking.
More RTD tweaking.
More RTD tweaking.
More RTD tweaking.
Added some Makefiles for generating documentation stuff.
More RTD tweaking.
Merge branch 'develop'

* develop:
  More RTD tweaking.
  Added some Makefiles for generating documentation stuff.
  More RTD tweaking.
  More RTD tweaking.
  More RTD tweaking.
  More RTD tweaking.
  Initial pass at a few docs.