Supports high/low confidence analysis, outputs to formatted file, and supports whole tree analysis (instead of manually selecting strains)
Uploading new script
Merge pull request #5 from mariamiskander/master

New Script
made changes as outlined by pull request #4
Merge pull request #4 from LaurenSlu/master

Supports high/low confidence analysis, outputs to formatted file, and su...
Merge branch 'master' into development