Added some java doc
smilesMap now saves the an unique extended smiles without
stereochemistry feature
new function in monomerstore that returns a list of all monomers
Auto assign Dynamic as name for adhoc monomers (XHELM-58)
parse helm notations with inline smiles in RNA (branch and backbone
monomers)
Import xHelm with Inline Smiles in RNA (missing store parameter)
new test for parsing xHelm with inline Smiles
new overload for standardize and getComplexNotation
revert changes
additional validity check for smiles code before adding adhoc monomer