Maintenance branch

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@11412 bf327186-88b3-11dd-a302-d386e5130c1c
New parent

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@11497 bf327186-88b3-11dd-a302-d386e5130c1c
Changed constants as per T2-1481

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@11804 bf327186-88b3-11dd-a302-d386e5130c1c
Changed to use parameterized versions

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@11842 bf327186-88b3-11dd-a302-d386e5130c1c
Tweaked pom

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@11893 bf327186-88b3-11dd-a302-d386e5130c1c
added snapshot-repository to be able to find taverna-parent

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@11935 bf327186-88b3-11dd-a302-d386e5130c1c
Added GET attempt as per T2-1679

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@11978 bf327186-88b3-11dd-a302-d386e5130c1c
Added datalink comparator for ordering datalinks in WF Explorer. Bug for T2-328: Order contents of Workflow Explorer.

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12031 bf327186-88b3-11dd-a302-d386e5130c1c
Removed some unused imports.

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12059 bf327186-88b3-11dd-a302-d386e5130c1c
T2-1713 Removed unrequired synchronization from getIterationDepth. Made
ownerToCache a synchronizedMap and removed class level synchronization from
cleanUp.

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12159 bf327186-88b3-11dd-a302-d386e5130c1c
T2-1713 Made ownerToCompletion a synchronizedMap and removed block level
synchronization.

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12160 bf327186-88b3-11dd-a302-d386e5130c1c
No need for updatePorts to be different

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12291 bf327186-88b3-11dd-a302-d386e5130c1c
Updated poms to use UTF-8 and have plugin versions
command-line-common now excludes raven 1.9 which could cause unit tests
to fail with Maven 3


git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12298 bf327186-88b3-11dd-a302-d386e5130c1c
Added detection of HTTPS connection problems in RemoteHelathChecker

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12415 bf327186-88b3-11dd-a302-d386e5130c1c
Setting the context classloader on the current thread with thread.setContextClassLoader(asyncActivity.getClass().getClassLoader());
This is mainly done for the sake of wsdl-activity to be able to set the classloader that will be able to pick up special Taverna SSLSocketFactory for HTTPS connections from wsdl activities.


git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12456 bf327186-88b3-11dd-a302-d386e5130c1c
Added capability to handle detection of loop connection problems as per T2-641

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12522 bf327186-88b3-11dd-a302-d386e5130c1c
Added health checker for loop connection problems as per T2-641

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12523 bf327186-88b3-11dd-a302-d386e5130c1c
Superclass for dataflows that have been nested

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12606 bf327186-88b3-11dd-a302-d386e5130c1c
Added awareness of data nature and encoding for T2-1750

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12711 bf327186-88b3-11dd-a302-d386e5130c1c
Added awareness of data nature and encoding for T2-1750

git-svn-id: https://taverna.googlecode.com/svn/taverna/engine/net.sf.taverna.t2.core/branches/maintenance@12715 bf327186-88b3-11dd-a302-d386e5130c1c