Don't overwrite cmd classes spec'd in setup.cfg

This allows a user to subclass a pbr command class,
or to specify their own command class that may not be
a subclass of a pbr command class. In the latter case
some of pbr's functionality would be overridden, so
log a warning if the command class specified by the user
is not a subclass of the corresponding pbr class.

Closes-Bug: #1300381