Add listing of samples per storage container/freezer
Merge branch 'master' into sue-dev-2.1
Bug fix -flow cell/flow_lane create (update pool_id if exists in seq_lib)
Add patient id to seq_libs query.
Display alt run# on sequencing run query, if no description field
Modify criteria used for displaying SGTC-style QC for HiSeq runs
Modify flow_cell/qc type determination
Add library barcode range to parameters for setting up flow cell
Update dissected samples when source sample is updated (eg. tissue type, tumor/normal)
Molecular assays list/queries: Use SQL to return associated protocol and sample records
Modify flow cell form for new field (archive_flag)
Work in progress - add publication info
Work in progress - publication/lane mapping
Modify sequencing run views/lists to incorporate publication flag
Misc cosmetic for publication management; add show view
Publications forms - minor modifications
Modify sort order for sequencing runs queries
- Sort by sequencing key (ie date), vs integer run#
- Requested by Mindrinos group (Molly Miranda)
Revise tag# grouping for index_tags view
- M_HLA192 tag#s start from 101, not from 1.
Bug fix - index_tags view
Bug fix - use ruby sort vs SQL sort (due to virtual field)
Merge branch 'master' into sue-dev-2.1

Conflicts:
	app/models/flow_cell.rb