restrict atoms inplace=False
fix test
geometry header sse fix
Merge pull request #517 from rmcgibbo/geometry-header-sse

geometry header sse fix
inplace
typo
typo
right. get the default correct
Merge pull request #515 from leeping/master

Added -pH and -temperature arguments to ShiftX2 wrapper.
Merge pull request #519 from rmcgibbo/restrict-atoms-2

atom_slice
Force unit cell vector components that are close to zero (and should be formally
zero) to zero exactly.
Fix (hopefully) the zeroing of relevant box vector components.
Merge pull request #521 from swails/master

Make unit cell vector components that are almost zero exactly zero.
Update README.md
Fixed bug with number of donors = 0.  Also split functionality of baker_hubbard
Merge branch 'master' of github.com:rmcgibbo/mdtraj