Things are really messy right now, but progress has been made on porting over the code to the Arduino Due! Got a basic application to use for testing while porting, which is the hello_world solution. The library will be in the form of an AtmelStudio Library solution, which can be (and currently is) used in another solution without having to build all of the source. This is currently how hello_world is working. Eventually, once the porting is done, hello_world will go away and the source code will live in the AtmelStudio solution's project directory. Currently, the source is in both the previously mentioned location, as well as were it was before (root_dir/src). This is because AtmelStudio doesn't seem to want to create a link to a source file, but rather insist on copying it over. Oh well.