merge stable
Merged galaxy/galaxy-central into default
merge stable
Merged galaxy/galaxy-central into default
merge stable
Update tag latest_2014.08.11 for changeset 548ab24667d6
scripts/common_startup.sh executes fetch_eggs.py correctly.
Tool API test submitting multiple select checkboxes as a list of values.
Run with:

./run_tests.sh -with_framework_test_tools -api test/api/test_tools.py:ToolsTestCase.test_multi_select_as_list
ToolForm: Fix datatype mapping, provide data mapping through api
Update tool_list to reflect recent change in use of envirnoment variables

tool_list.py now makese use of GALAXY_TEST_TOOL_CONF and exits throwing an appropriate error
Update tool_list to reflect recent change in use of envirnoment variables

tool_list.py now makese use of GALAXY_TEST_TOOL_CONF and exits throwing an appropriate error
Fixes to tool_list.py for legacy configurations and modified tool confs.

Now uses roughly the same order of precedence as Galaxy proper's config.
Merge latest next-stable.
Fix various BibTex styling problems.
Need to get out of the BibTeX formatting game as quickly as possible this is a loosing battle, but until then plugging holes in the ship.
Grunting at the scripts.
Merge latest next-stable.
ToolForm: Improve validation, minor fixes
Fix bug in finding relocated tool_data_table_conf.xml
Merge next-stable.
Adding in the ability to configure a tool 'auto-load' directory.