added screed and read_parser streaming testing

Marked as known failing since they currently fail.
Will investigate.

Relevant to #393, #654
On Thu, Nov 13, 2014 at 08:11:24AM -0800, bocajnotnef wrote:
> > +        utils.get_test_data('test-abund-read-2.fa'))
> > +    assert os.path.exists(o)
> > +
> > +
> > +@attr('known_failing')
> > +def test_read_parser_streaming_bzfq():
> > +    # bzip compressed
> > +    o = read_parser_streaming_function(utils.get_test_data('100-reads.fq.bz2'))
> > +    assert os.path.exists(o)
> > +
> > +
> > +@attr('known_failing')
> > +def test_read_parser_streaming_gzfq():
> > +    # bzip compressed
> > +    o = read_parser_streaming_function(utils.get_test_data('100-reads.fq.gz'))
> > +    assert os.path.exists(o)
> 
> If I put test in the name nosetests tries to run it. Understanding name change, though; perhaps streaming_read_helper or similar?

I thought nose only ran things with test at the beginning.  Huh.

Uh, 'execute_streaming_diginorm' would then be my suggestion.

--t
-- 
C. Titus Brown, ctb@msu.edu