Update code to v1beta2

Nicole, if you populated the information from the web or from files it can me a difference between it being 0-based or 1-based.  Below is direct from NCBI:

http://www.ncbi.nlm.nih.gov/books/NBK44476/

*The refSNP page for rs28928880 shows the refSNP’s amino acid position to be 25, but b126_SNPContigLocusId_36_1.bcp file for human shows the amino acid position of rs28928880 as 24.Why are these data different?*

*The sequence coordinate data for the XML, ASN.1, .bcp, and the Genotype/genotype_by_gene files were changed from 1-based to 0-based starting with dbSNP build 125. The ASN.1_flat, Chromosome Report, and the web page reports remain 1- based. (6/30/06)*