pymol 1.7.2.1
astrometry-net 0.50

Fixes #1139.
Data-science-toolbox: update sha1.

Fixes #1160.
nextflow 0.10.0

Closes #1164.
mbsystem 5.4.2202

Closes #1165.
opencv: add libdc1394 as optional dependency

Closes #1167.
spades 3.1.1
swrcfit 1.3 (new formula)

Closes #1161.
Nexusformat: adding recommended hdf4 dependency

Closes #1166.
vips 7.40.8

Includes fix for jcupitt/libvips#172.

Closes #1172.
openni2: fix patch shasum

Closes #1169.
edirect 2.00
proverif 1.88.1 (new formula)

Closes #1168.
edirect: Update sha1
edirect: Add tag
picard-tools 1.120

Closes #1184.
seqtk/tabtk: Update and move tabtk to separate build

The latest seqtk GitHub moves tabtk to its own repo, breaking HEAD
(chapmanb/bcbio-nextgen#592). This creates separate builds for both,
fixes the tabtk issue, and moves to GitHub versioning of seqtk/tabtk
since it doesn't have a formal release process.

Closes #1183.
abyss: Add bioinformatics tag
pbsuite: Add dependency on blasr and python

Add bioinformatics tag and the DOI for PBHoney.
abyss: Run make check and add --without-check