started re-implementation of code

- added root libraries in target_link_libraries in CMakeLists
- enabled FINd_PACKGE/etc for ROOT
- renamed pulse.h to acquisition.h for clean naming convention (there can be multiple pulses in one acquisition)
- untrack pulse.h
- add acquisition.h
minor changes in sample.cc/.h and main.cxx

- instead of GetBlabla() write Blabla(), SetBlaBla remain, but should be private
Added two files to CmakeList

- added acquisition.h
- added measurement.cc
started tracking of measurement class
added and started tracking acquisition class
added AcqsLoader to main
main functionalities of old code added

- acquisition class holds methods from olt struct (SignalFinder(), GetOffsetNoise(), ...)
- measurement cladd holds methods to stear the analysis
  -> some need to be moved to a new analysis class
- for usage of param class, we need a config file reader library
- same for sample class
removed "EUDAQ" legacy

 On branch master
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 Changes to be committed:
	modified:   cmake/Platform.cmake
	modified:   cmake/version.cmake.tex
	modified:   doc/doxygen/Doxyfile.in