moved cutout creation utility to seperate module, now under image umbrella as well
fixed default output errors in segmap, new flagging system now implemented but not currently printing to output catalog, galaxy now uses new module cutout
minor cosmetic updates
image module now imports cutout module
and the slow change from r_ellip to r_ell begins
New flags sytem implemented and seems to be working smoothly, still not printing output in catalog, added features to parameter file