Carl, I can't see the code right now, but we're going to want to make different join implementations have the same signature I think.

On Thu, Feb 27, 2014 at 4:31 PM, Carl Yeksigian <notifications@github.com>
wrote:

>> +    })
>> +
>> +    // finally, erase the partition key and return the result.
>> +    filtered.map(rrtu => rrtu._2)
>> +  }
>> +
>> +  /**
>> +   * This method does a join between different types which can have a corresponding ReferenceMapping.
>> +   *
>> +   * This method does a cartesian product between the two, then removes mismatched regions.
>> +   *
>> +   * This is SLOW SLOW SLOW, and shouldn't be used for anything other than correctness-testing on
>> +   * realistic sized sets.
>> +   *
>> +   */
>> +  def cartesianFilter[T, U](sc: SparkContext,
> I failed when doing a copy-paste of the partitionAndJoin method interface; I'll get rid of sc and seqDict.
> ---
> Reply to this email directly or view it on GitHub:
> https://github.com/bigdatagenomics/adam/pull/117/files#r10143364