added annotation shift for the 3'UTR
fixed bug in the GFF (FOR ENSEMBL you have to rebuild the serialized
files!!!)
added flag --create-refseq-c for the removal of predicted transcripts
- addded 3'UTR duplication annotation
- fixed run out of 3'UTR
- fixed bug in interval tree were the median is the point
-increased version number
added test for median/point overlap
- really fixed
- merge suggestions/fixed by Orion
- added catch clause so Jannovar will no longer crash if error causing
variants are found
- switched to STDERR for loggin output
Merge branch 'master' of github.com:charite/jannovar

Conflicts:
	src/main/java/jannovar/Jannovar.java
	src/main/java/jannovar/annotation/IntergenicAnnotation.java
	src/main/java/jannovar/interval/Interval.java
	src/main/java/jannovar/io/UCSCKGParser.java