Species parsing

### Common part
This is one PR of a bunch of PRs to finalize parsing, thermodynamics and transport.  There will be several PRs, the only thing missing now is the merging with *master*, which will come once the setup of the PRs is made.  To make things as clear as I can, all the PRs will have a common section showing the graph with a star to mark the current PR.
```
xml_parser <-- input_parsing_format <-- ascii_parser <-- species_parsing * <-- \
                                                                                \
NASA polynomials <-- UnifiedThermo <---------------------------------------------- thermo_parsing <--
                                     \                                                                \
transport_new <------------------------  transport_thermo <--------------------------------------------- transport_thermo_parser
```
So here is the parser/thermo/transport bunch of PR.  There are also two more PRs, the ```opt_transport``` and the ```almost_Exact```. 
The ```opt_transport``` merges ```transport_thermo_parser``` with ```conditions_reac```, which enables to pass a ```KineticsConditions<StateType,VectorStateType>``` object instead of temperature, which translates into computing once and for all the ```TempCache<StateType>``` object instead of locally where it's needed.
```almost_Exact``` takes in the ```kin_reset```.

### This PR

The species list is parseable by everyone.  The main changes is certainly the names of the files, there is no more reason now to keep the _ascii_ in the name, this is the biggest change.