Working on actuation integration
Stepper motors should be integrated, needs testing
finished porting code for LED board, other small tweaks

renamed ACL1 and GYRO1 to ACL_0 and GYRO_0 to be consistant with rest of code
generalized the magnometer and ADC definitions to the system.h file
added more commenting
some testing
fixed porting error
Created orange and "off" patterns.
tweak to comm uart
consolidated comm_uart background code

also added some compiler commands to GPIO.c file
general cleanup

moved actuation stuff around, renamed stepper enable pins in background uart, cleaned up GPIO stuff (moved stepper motor code to actuation timer files),.
lots of tweaks.
fixed a UART bug
mapped LED outputs for the thruster debugging board, fixed error in config bits

One of the pins was dual purposed for USB and for GPIO, and the USB function was taking precedence. This is fixed now.
changed thruster UART device, made all analog pins digital by default.

UART now works! (at least for the thruster board)
changed timer scalers for thruster debug board
SPI working on new microcontrollers, added second SPI channel

also fixed some compilation bugs
fixed bugs on actuation board

fixed TRIS, and logic for setting output pins
fixed ADC (temporary commit, do not branch off of this!!!!)
tweaked code to work for longer LED strips
sensors working on new sub
added support for I2C bus reset