deleted the code for creating 'gaps' in the data
Update README to include another TODO
create data folder to store data sets
update gitignore with .RData[Conflict]
create new input file
small edits to plot-pcfs.R
update create-data.R and created new data set
Update gitignore
Update code to read in simulated data as a list of data frames. We no longer multiple variants of the siulation parameters within a data set (e.g. m, sigma0). Removed the cumbersome decomposing/bookeeping in the original code that required multiple instances of plyr functions.
Update main.R to call the new funciton run_calc()
Delete R files that are no longer needed
Update plot-pcfs.R to plot FPCs using ggplot with pointwise quantiles as uncertainty bands
Delete old input files
Create data sets with 5 obs per curve and 10 obs per curve