fixed up xml file to reflect actual tmt structure
aesthetic changes and change to xml_parse call for new usage
great deal of substance added
xml parser now reads in tmt xml file and changes pattern name and pattern in vague functionality
Merge branch 'master' of https://github.com/mschuchard/soea

Conflicts:
	test_soea.cpp
changed test call to xml parser for new usage
refactoring code for more appropriate functionality and streamlining
"skeleton" functionality now in place and just needs to be "fleshed out"