adds make_sequences script
adds error models python code
adds script for countmat.rda
save the count matrix
add QCstats file
delete old R code (from original short paper)
add csv files
delete shell scripts from old (short) paper
adds error models
delete results from old (short) paper
adds geuvadis sample subfolders
adds DE experiment results + scripts
delete gtf cleaning code from earlier paper
add make_insert_sizes script
adds ten_genes_experiment files
fix gitignore
add chr22.gtf to gitignore
fix rda generating scripts
update gitignore
update gitignore since alignments are now on dropbox