Changed tcsam::STR_FIT_... and tcsam::FIT_...option variable names from TOTAL, SEX,SEX_EXTENDED etc to TOT,X,XE,... and added cases XM, XS, and XMS. Updated getFitType(...) functions to reflect same. Updated calcNLLs_CatchAtSize to reflect same, added output of obs and mod normalized size frequencies as part of output to R in model.fits. Modified IndexRange to interpret a single input number as a max, rather than min, index value. Added several new parameterizations for the logistic and double logistic selectivity functions. Implemented parameter jitter. Changed BioData input format to require a "typical" fishing year midpoint and mating season, as well as "atypical" values by year, rather than specifying each for every model year.
Completed new input format for AggregatedCatchData.