Use secure_tmp_dir for Excel::Writer::XLSX.
Genome Comparator: Align after each locus rather than at the end.
This removes the need to store all the extracted sequences so should
save memory.
Fix memory leak in offline jobs when output large amounts of data.
Genome Comparator: Fix Excel output of unique strains.
Table needs to be written in sequential row order since switching on
memory optimizations in Excel::Writer::XLSX.
Autotagger: Cache statement handles.
Autotagger: Cache statement handles to prevent memory leaks.
Autotagger: Use min allele length as word_size.
As we're only looking for exact matches this will be quicker.
Method to free Locus object when finished with it.
Genome Comparator: Limit MUSCLE jobs to 4GB by default.
This can be overridden in config.xml by setting the max_muscle_mb
attribute to the number of MB to allow.
Version 1.8.1.