Added NOOP system test.
Added Sequence ID initialization to current time seconds since epoch.
Used key and ACL set by kinetic-cpp-examples/set_acls for C NOOP init of Java simulator, but simulator fails to respond to NOOP request. Made NOOP system test pending for now...
Updated tests to account for elimination of connectionID parameter removal from KineticConnection_Init, since computed by the system now.
Changed kinetic test port to default kinetic port and updated Ruby test server to use it to get system test a little further on TravisCI until lack of response is figured out from Java simulator
Updated all and ci rake tasks to use new test_all task which executes unit, integration and system tests in order
Updated to use new kinetic-ruby resident server, and ripped out old version from Rakefile.
Fixed syntax error in log file params.
Updates to try and make Doxygen generate doxygenized kinetic_api.h, but still doesn't work.
Fixed up some Doxygen issues, and removed layout file... for now at least.
Added Kinetic Java simulator and wired up for system tests... which are currently pending