bug 25532 - major relocation batch, this will break a lot of jenkins builds,
I will fix it and triage the fix on Monday.

[git-p4: depot-paths = "//depot/software/smrtanalysis/bioinformatics/tools/pbalign/": change = 138434]
bug 25553 - remove localpath from the comment
[git-p4: depot-paths = "//depot/software/smrtanalysis/bioinformatics/tools/pbalign/": change = 138940]
   Bug 25356. Add script to create a SAM header with chemistry information.	

[git-p4: depot-paths = "//depot/software/smrtanalysis/bioinformatics/tools/pbalign/": change = 139592]
   Bug 25356. Fix typo.	

[git-p4: depot-paths = "//depot/software/smrtanalysis/bioinformatics/tools/pbalign/": change = 139616]
   Bug 25356. Add pysam to pbalign depencencies.

[git-p4: depot-paths = "//depot/software/smrtanalysis/bioinformatics/tools/pbalign/": change = 139916]
Check return code of releasing gmap db lock.
bug 25106	

[git-p4: depot-paths = "//depot/software/smrtanalysis/bioinformatics/tools/pbalign/": change = 141003]
Disable options '--useccs' and '--forQuiver' to be used together. 
Add an option 'loadQVs', which is similar to '--forQuiver' except that
it can be used together with '--useccs'.
   Add a cram test
bug 25481	

[git-p4: depot-paths = "//depot/software/smrtanalysis/bioinformatics/tools/pbalign/": change = 141024]