More tweaks to ChromatinCropper analysis and save parameters
changed default behavior of a few functions to silent
fixed bug in non-verbose WarpImage error-handling
added variable input options to read_parameterfile
Added new function to change the z-calibration curve used for a molecule list and to compute new z-positions from astigmatism data.
simplified msublist using new IndexStructure function.
Updated ExtractPath to match extractpath.
updated matlab-storm readme to reflect removal of GPU code from STORMrender
Updates to ChromatinCropper during first complete repeat data analysis.
Important changes in exporting data and dealing with 3D data.
started adding new drift correction from integrated bead movies into ChromatinCropper.
Gave function new name FeducialDriftCorrection. Earlier version is now in new Depreciated folder.
updates to error handling in ApplyChromeWarp
Reorganizing directory structure in STORMfinder library
Modified STORMrender to enforce square image axes.
adjust step size for contrast bars in STORMrender
modify STORMrender fig layout for square axes.
Made WriteParsTxt its own function (previously hardcoded in RunDotFinder).
fixed some issues with modify_script handling of multiple inputs
minor adjustments to STORMrender messages
RunDotFinder now uses new WriteParsTxt function
playing with imaxes scale (need to rewrite this to make it menu adjustable).
Fixed bug in interpolated bead drift correction.