Added calculateGradient() method
Fixed some bad isPathValid() calls that didn't specify the Joint Group:
 for some reason it ignores the ACM so it was detecting collisions between the zlow plane and base link
Added gradient descent warp() function.
Fixed fileread() and filewrite() to only save/load an apple when present.
Other small fixes/cleanup.
Added getRandomPlan() and getRandomPlanNear() methods to KDTree
Replaced grid with target_volume structure in build_lib.cpp
Removed all references to plan_groups. We are now fully aboard the KDTrain.
Fixed bugs in getRandomPlanStartingNearby