Merge branch 'release/0.188' into develop
corrected bcftools_view_options description to say the correct v1 default
corrected description
replaced vcf_sites step with new bcftools_generate_sites_file step in the vrtrack_auto_qc_with_genotype_checking pipeline and made it and bcftools_gtcheck step work with bcf input for the genotypes file
removing files no longer used
irods datasource methods can now take a file as the source containing multiple imeta queries to aggregate over
calculate the ratio to 2 decimal places, not 3, so the fudge on ratio == 1 is more likely to work
sort the file with -g to handle scientific notation, and scale with minimum discordance as 0 so the top hit is not always 1
if there is no call, set ./. in the vcf
when only 1 line, set concordance to 1; grep out CN lines instead of ignoring comment lines
updated test expectations now that we round ratio to 2 decimal places
version bump
Merge branch 'release/0.189'