Bumping version of SeqWare to 1.1.0-alpha.5
Just reformating the file
Few small tweaks, added TODO notes
Adding the path to the key in this workflow to gitignore
notes added
Comment
Chaning Roddy path
the bundle he sent had a different config path
working on the vcf upload portion of the code
Working on VCF upload, need to test now
adding cleanup and upload components
Merge tag '2.6.4' into develop

This tag is for the decider. Also can be use to make the 2.6.4 bwa workflow
Small changes to param mem
Merge branch 'develop' of https://github.com/SeqWare/public-workflows into develop
Merge branch 'develop' into feature/brian_dkfz_workflow_improvements_1

Conflicts:
	.gitignore
	workflow-DKFZ-bundle/src/main/java/io/seqware/pancancer/DKFZBundleWorkflow.java
	workflow-DKFZ-bundle/workflow/config/DKFZ-Workflow-Bundle.ini
fixed typo that caused a bug with ignore lane count flag
downgrading the seqware version for now
Merging branches
finished with the merge of develop
Update README.md