Merge pull request #13 from jread-usgs/master

old plot codes added, and created new year/trend-specific call for Kd
Changed default kd value.
Some changes to get calc.strat.onset to work for me.
Merge branch 'master' of github.com:GLEON/WiLMA

Conflicts:
	R/GLM.functions.R
Made version of calc.strat.days.R that runs on Condor.
Added water level output.
removed old rGLM lib version.
Got rid of some old unused files.
Added a bunch of new on cluster code (and new rGLM version)
Condor wrapper for run.strat.out
Huge code cleanup for Gretchen's output metrics.
Stash these "new secchi" data. Came from CFL colleague.
New, differnet computers to ignore.
Updated versions of condor wrappers. [I don't know which of these are important, need to delete crap]
Removing unused code.
This file isn't used anywhere.
This example isn't necessary anymore. We have more up-to-date examples around now.
Trying to organize library code and entry-point (Where you start running from) code differently.
Missed these on library move.
That was a really old, outdated example