if theres more than 1k samples use basement for default analysis
Merge pull request #74 from andrewjpage/post_analysis_default_basement

if theres more than 1k samples use basement for default analysis
Debugging fasta header parsing
Debugging gene name extraction
Added AUTHORS file
Merge pull request #75 from aslett1/master

Added AUTHORS file
Remove quotes from GFF IDs
Code cleanup
Merge pull request #76 from carlacummins/master

Bug fixing; Removes quotes from fasta headers; Edited regex replacing characters in filenames; updated tests
Merge pull request #77 from andrewjpage/master

Allow user specify sorting when reordering spreadsheet against a tree