We remove alignment cut in alignment processor. This is done in Millepede automatically using ALL degrees of freedom from (hits - parameters). Remember the chi2 of alignment and the chi2 of the individual tracks is different. One is a single number and the other is a collection, with one element for each track. We chose chi2cut= 1 1, so we remove tracks over a certain chi2 depending on degrees of freedom and resolution.
This is the commit before we make multiple configuration file for different examples.