Implementing session notes
Working on session notes
Refactor session related code form ClientApplication to SessionManager
Save session notes and fine-tune updating of visualizations
More detailed error message for content length exception
Save workflow layout to session
Merge branch 'master' into save-layout

Conflicts:
	src/main/java/fi/csc/microarray/client/session/SessionSaver.java
Allow auto layout to update dataset position
Typo fix.
Merge branch 'master' of https://github.com/chipster/chipster.git
samtools-subset-R: added indexing the result file
subset-fastq.R: added zipping the result file
Fix example sessions

Removing of an example session removes also the corresponding zip
session, example sessions are allowed to have .zip in their names and
check if session was removal was prevented before reporting its success.
Merge branch 'master' of https://github.com/chipster/chipster.git
Merge branch 'master' into save-layout
Merge branch 'master' into session-notes

Conflicts:
	src/main/java/fi/csc/microarray/client/ClientApplication.java
	src/main/java/fi/csc/microarray/client/SwingClientApplication.java
Merge branch 'save-layout'

Conflicts:
	src/main/java/fi/csc/microarray/client/ClientApplication.java
	src/main/java/fi/csc/microarray/client/SwingClientApplication.java
	src/main/java/fi/csc/microarray/client/session/SessionLoaderImpl2.java
	src/main/java/fi/csc/microarray/client/session/schema2/DataType.java
	src/main/java/fi/csc/microarray/client/session/schema2/FolderType.java
	src/main/java/fi/csc/microarray/client/session/schema2/InputType.java
	src/main/java/fi/csc/microarray/client/session/schema2/LinkType.java
	src/main/java/fi/csc/microarray/client/session/schema2/LocationType.java
	src/main/java/fi/csc/microarray/client/session/schema2/NameType.java
	src/main/java/fi/csc/microarray/client/session/schema2/ObjectFactory.java
	src/main/java/fi/csc/microarray/client/session/schema2/OperationType.java
	src/main/java/fi/csc/microarray/client/session/schema2/ParameterType.java
	src/main/java/fi/csc/microarray/client/session/schema2/SessionType.java
Switch SSL to normal IO instead of NIO
Merge branch 'ssl-fix'
Fix dependencies

Fix SessionManager, SessionSaver and SessionsLoader dependencies. Warn
about unsaved changes, when session notes are added.
Merge branch 'master' of https://github.com/chipster/chipster.git